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BMCBI
2008
168views more  BMCBI 2008»
15 years 6 months ago
Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements
Background: Since experimental determination of protein folding pathways remains difficult, computational techniques are often used to simulate protein folding. Most current techn...
Qingwu Yang, Sing-Hoi Sze
CANDC
2008
ACM
15 years 6 months ago
'Genome order index' should not be used for defining compositional constraints in nucleotide sequences
Background: The Z-curve is a three dimensional representation of DNA sequences proposed over a decade ago and has been extensively applied to sequence segmentation, horizontal gen...
Eran Elhaik, Dan Graur, Kresimir Josic
ENGL
2008
78views more  ENGL 2008»
15 years 6 months ago
Threshold for Positional Weight Matrix
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
Yunlian Pan, Sieu Phan
BIOINFORMATICS
2006
101views more  BIOINFORMATICS 2006»
15 years 6 months ago
A lock-and-key model for protein-protein interactions
Motivation: Protein-protein interaction networks are one of the major post-genomic data sources available to molecular biologists. They provide a comprehensive view of the global ...
Julie L. Morrison, Rainer Breitling, Desmond J. Hi...
CN
2006
62views more  CN 2006»
15 years 6 months ago
Key bundles and parcels: Secure communication in many groups
We consider a system where each user is in one or more elementary groups. In this system, arbitrary groups of users can be specified using the operations of union, intersection, a...
Eunjin Jung, Alex X. Liu, Mohamed G. Gouda