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BMCBI
2011
14 years 10 months ago
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks v
Background: Constraint-based approaches facilitate the prediction of cellular metabolic capabilities, based, in turn on predictions of the repertoire of enzymes encoded in the gen...
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwoz...
BMCBI
2011
14 years 10 months ago
Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities
Background: Gene regulatory networks play essential roles in living organisms to control growth, keep internal metabolism running and respond to external environmental changes. Un...
Yao Fu, Laura R. Jarboe, Julie A. Dickerson
BMCBI
2011
14 years 10 months ago
New Words in Human Mutagenesis
Background: The substitution rates within different nucleotide contexts are subject to varying levels of bias. The most well known example of such bias is the excess of C to T (C ...
Alexander Y. Panchin, Sergey I. Mitrofanov, Andrei...
PODS
2009
ACM
119views Database» more  PODS 2009»
16 years 7 months ago
Exceeding expectations and clustering uncertain data
Database technology is playing an increasingly important role in understanding and solving large-scale and complex scientific and societal problems and phenomena, for instance, un...
Sudipto Guha, Kamesh Munagala
JCDL
2009
ACM
130views Education» more  JCDL 2009»
16 years 1 months ago
Whetting the appetite of scientists: producing summaries tailored to the citation context
The amount of scientific material available electronically is forever increasing. This makes reading the published literature, whether to stay up-to-date on a topic or to get up ...
Stephen Wan, Cécile Paris, Robert Dale