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ICDT
2010
ACM
147views Database» more  ICDT 2010»
15 years 10 months ago
Querying Parse Trees of Stochastic Context-Free Grammars
Stochastic context-free grammars (SCFGs) have long been recognized as useful for a large variety of tasks including natural language processing, morphological parsing, speech reco...
Sara Cohen, Benny Kimelfeld
SBBD
2004
119views Database» more  SBBD 2004»
15 years 8 months ago
Computing the Dependency Basis for Nested List Attributes
Multi-valued dependencies (MVDs) are an important class of constraints that is fundamental for relational database design. Although modern applications increasingly require the su...
Sven Hartmann, Sebastian Link
BMCBI
2006
120views more  BMCBI 2006»
15 years 6 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
BMCBI
2006
124views more  BMCBI 2006»
15 years 6 months ago
HybGFS: a hybrid method for genome-fingerprint scanning
Background: Protein identification based on mass spectrometry (MS) has previously been performed using peptide mass fingerprinting (PMF) or tandem MS (MS/MS) database searching. H...
Kosaku Shinoda, Nozomu Yachie, Takeshi Masuda, Nao...
BMCBI
2006
144views more  BMCBI 2006»
15 years 6 months ago
methBLAST and methPrimerDB: web-tools for PCR based methylation analysis
Background: DNA methylation plays an important role in development and tumorigenesis by epigenetic modification and silencing of critical genes. The development of PCR-based methy...
Filip Pattyn, Jasmien Hoebeeck, Piet Robbrecht, Ev...