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BMCBI
2011
15 years 1 months ago
Properties of Metabolic Graphs: Biological Organization or Representation Artifacts?
Background: Standard graphs, where each edge links two nodes, have been extensively used to represent the connectivity of metabolic networks. It is based on this representation th...
Wanding Zhou, Luay Nakhleh
CIKM
2008
Springer
15 years 8 months ago
Passage relevance models for genomics search
We present a passage relevance model for integrating syntactic and semantic evidence of biomedical concepts and topics using a probabilistic graphical model. Component models of t...
Jay Urbain, Ophir Frieder, Nazli Goharian
WWW
2008
ACM
16 years 7 months ago
Mining, indexing, and searching for textual chemical molecule information on the web
Current search engines do not support user searches for chemical entities (chemical names and formulae) beyond simple keyword searches. Usually a chemical molecule can be represen...
Bingjun Sun, Prasenjit Mitra, C. Lee Giles
PETRA
2009
ACM
16 years 1 months ago
Towards faster activity search using embedding-based subsequence matching
Event search is the problem of identifying events or activity of interest in a large database storing long sequences of activity. In this paper, our topic is the problem of identi...
Panagiotis Papapetrou, Paul Doliotis, Vassilis Ath...
WSDM
2012
ACM
309views Data Mining» more  WSDM 2012»
14 years 2 months ago
Mining contrastive opinions on political texts using cross-perspective topic model
This paper presents a novel opinion mining research problem, which is called Contrastive Opinion Modeling (COM). Given any query topic and a set of text collections from multiple ...
Yi Fang, Luo Si, Naveen Somasundaram, Zhengtao Yu