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BMCBI
2007
105views more  BMCBI 2007»
15 years 7 months ago
Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences
Background: The secondary structure of an RNA must be known before the relationship between its structure and function can be determined. One way to predict the secondary structur...
Stefan Engelen, Fariza Tahi
CORR
2007
Springer
104views Education» more  CORR 2007»
15 years 7 months ago
Sorting and Selection in Posets
Classical problems of sorting and searching assume an underlying linear ordering of the objects being compared. In this paper, we study a more general setting, in which some pairs...
Constantinos Daskalakis, Richard M. Karp, Elchanan...
PRL
2007
180views more  PRL 2007»
15 years 6 months ago
Feature selection based on rough sets and particle swarm optimization
: We propose a new feature selection strategy based on rough sets and Particle Swarm Optimization (PSO). Rough sets has been used as a feature selection method with much success, b...
Xiangyang Wang, Jie Yang, Xiaolong Teng, Weijun Xi...
BMCBI
2011
15 years 1 months ago
PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...
NAR
2011
199views Computer Vision» more  NAR 2011»
14 years 10 months ago
RepTar: a database of predicted cellular targets of host and viral miRNAs
Computational identification of putative microRNA (miRNA) targets is an important step towards elucidating miRNA functions. Several miRNA target-prediction algorithms have been de...
Naama Elefant, Amnon Berger, Harel Shein, Matan Ho...