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CEC
2011
IEEE
14 years 7 months ago
Comparing alternative energy functions for the HP model of protein structure prediction
Abstract—Protein structure prediction is the problem of finding the functional conformation of a protein given only its amino uence. The HP lattice model is an abstract formulat...
Mario Garza-Fabre, Eduardo Rodriguez-Tello, Gregor...
BMCBI
2005
122views more  BMCBI 2005»
15 years 7 months ago
GenClust: A genetic algorithm for clustering gene expression data
Background: Clustering is a key step in the analysis of gene expression data, and in fact, many classical clustering algorithms are used, or more innovative ones have been designe...
Vito Di Gesù, Raffaele Giancarlo, Giosu&egr...
JSC
2010
155views more  JSC 2010»
15 years 5 months ago
Algorithms for solving linear systems over cyclotomic fields
We consider the problem of solving a linear system Ax = b over a cyclotomic field. What makes cyclotomic fields of special interest is that we can easily find a prime p that sp...
Liang Chen, Michael B. Monagan
RECOMB
2008
Springer
16 years 7 months ago
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins
Abstract. In engineering protein variants by constructing and screening combinatorial libraries of chimeric proteins, two complementary and competing goals are desired: the new pro...
Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg
ERSHOV
2009
Springer
15 years 11 months ago
Anti-unification Algorithms and Their Applications in Program Analysis
A term t is called a template of terms t1 and t2 iff t1 = t1 and t2 = t2, for some substitutions 1 and 2. A template t of t1 and t2 is called the most specific iff for any template...
Peter E. Bulychev, Egor V. Kostylev, Vladimir A. Z...