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RECOMB
2005
Springer
16 years 7 months ago
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations
Background: Most cellular processes are carried out by multi-protein complexes, groups of proteins that bind together to perform a specific task. Some proteins form stable complex...
Elena Zotenko, Katia S. Guimarães, Raja Jot...
ANCS
2006
ACM
16 years 1 months ago
Advanced algorithms for fast and scalable deep packet inspection
Modern deep packet inspection systems use regular expressions to define various patterns of interest in network data streams. Deterministic Finite Automata (DFA) are commonly used...
Sailesh Kumar, Jonathan S. Turner, John Williams
BMCBI
2007
128views more  BMCBI 2007»
15 years 7 months ago
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand bindin
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...
Lei Xie, Philip E. Bourne
INFOCOM
2006
IEEE
16 years 1 months ago
Reverse Hashing for High-Speed Network Monitoring: Algorithms, Evaluation, and Applications
— A key function for network traffic monitoring and analysis is the ability to perform aggregate queries over multiple data streams. Change detection is an important primitive w...
Robert T. Schweller, Zhichun Li, Yan Chen, Yan Gao...
EMSOFT
2008
Springer
15 years 8 months ago
A generalized static data flow clustering algorithm for mpsoc scheduling of multimedia applications
In this paper, we propose a generalized clustering approach for static data flow subgraphs mapped onto individual processors in Multi-Processor System on Chips (MPSoCs). The goal ...
Joachim Falk, Joachim Keinert, Christian Haubelt, ...