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BMCBI
2006
110views more  BMCBI 2006»
15 years 6 months ago
Modelling the network of cell cycle transcription factors in the yeast Saccharomyces cerevisiae
Background: Reverse-engineering regulatory networks is one of the central challenges for computational biology. Many techniques have been developed to accomplish this by utilizing...
Shawn Cokus, Sherri Rose, David Haynor, Niels Gr&o...
BMCBI
2006
137views more  BMCBI 2006»
15 years 6 months ago
Bounded search for de novo identification of degenerate cis-regulatory elements
Background: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential ...
Jonathan M. Carlson, Arijit Chakravarty, Radhika S...
CORR
2007
Springer
110views Education» more  CORR 2007»
15 years 6 months ago
Graph Annotations in Modeling Complex Network Topologies
abstract such additional information as network annotations. We introduce a network topology modeling framework that treats annotations as an extended correlation profile of a net...
Xenofontas A. Dimitropoulos, Dmitri V. Krioukov, A...
JSAC
2008
165views more  JSAC 2008»
15 years 6 months ago
Energy-Efficient Routing Schemes for Underwater Acoustic Networks
Interest in underwater acoustic networks has grown rapidly with the desire to monitor the large portion of the world covered by oceans. Fundamental differences between underwater a...
Michele Zorzi, Paolo Casari, Nicola Baldo, Albert ...
ECCC
2007
86views more  ECCC 2007»
15 years 6 months ago
Testing Halfspaces
This paper addresses the problem of testing whether a Boolean-valued function f is a halfspace, i.e. a function of the form f(x) = sgn(w·x−θ). We consider halfspaces over the ...
Kevin Matulef, Ryan O'Donnell, Ronitt Rubinfeld, R...