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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
15 years 11 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
COMPGEOM
2005
ACM
15 years 8 months ago
The Visibility-Voronoi Complex and Its Applications
We introduce a new type of diagram called the VV(c)-diagram (the visibility–Voronoi diagram for clearance c), which is a hybrid between the visibility graph and the Voronoi diag...
Ron Wein, Jur P. van den Berg, Dan Halperin
PSB
2004
15 years 8 months ago
Multiplexing Schemes for Generic SNP Genotyping Assays
Association studies in populations relate genomic variation among individuals with medical condition. Key to these studies is the development of efficient and affordable genotypin...
Roded Sharan, Amir Ben-Dor, Zohar Yakhini
BMCBI
2007
265views more  BMCBI 2007»
15 years 6 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
CCR
2010
184views more  CCR 2010»
15 years 6 months ago
Characterising temporal distance and reachability in mobile and online social networks
The analysis of social and technological networks has attracted a lot of attention as social networking applications and mobile sensing devices have given us a wealth of real data...
John Tang, Mirco Musolesi, Cecilia Mascolo, Vito L...