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BMCBI
2010
205views more  BMCBI 2010»
15 years 6 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
BMCBI
2011
14 years 10 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
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ENVSOFT
2002
129views more  ENVSOFT 2002»
15 years 6 months ago
Linking GIS and water resources management models: an object-oriented method
Many challenges are associated with the integration of geographic information systems (GISs) with models in specific applications. One of them is adapting models to the environmen...
Daene C. McKinney, Ximing Cai
JCSS
2000
71views more  JCSS 2000»
15 years 6 months ago
Path Constraints in Semistructured Databases
We investigate a class of path constraints that is of interest in connection with both semistructured and structured data. In standard database systems, constraints are typically ...
Peter Buneman, Wenfei Fan, Scott Weinstein
JDM
2008
112views more  JDM 2008»
15 years 6 months ago
Reverse Engineering from an XML Document into an Extended DTD Graph
The extensible markup language (XML) has become a standard for persistent storage and data interchange via the Internet due to its openness, self-descriptiveness, and flexibility....
Herbert Shiu, Joseph Fong