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ICML
2007
IEEE
16 years 7 months ago
Structural alignment based kernels for protein structure classification
Structural alignments are the most widely used tools for comparing proteins with low sequence similarity. The main contribution of this paper is to derive various kernels on prote...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
ISBI
2006
IEEE
16 years 7 months ago
Complex wavelets for registration of tagged MRI sequences
Tagged Magnetic Resonance Imaging (MRI) is currently the reference MR modality for myocardial motion and strain analysis. Mutual Information (MI) based non rigid registration has ...
Estanislao Oubel, Alejandro F. Frangi, Alfred O. H...
275
Voted
CC
2009
Springer
153views System Software» more  CC 2009»
16 years 7 months ago
Register Spilling and Live-Range Splitting for SSA-Form Programs
Register allocation decides which parts of a variable's live range are held in registers and which in memory. The compiler inserts spill code to move the values of variables b...
Matthias Braun, Sebastian Hack
RECOMB
2005
Springer
16 years 7 months ago
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Abstract. The interpretation of large-scale protein network data depends on our ability to identify significant sub-structures in the data, a computationally intensive task. Here w...
Jacob Scott, Trey Ideker, Richard M. Karp, Roded S...
STOC
2004
ACM
109views Algorithms» more  STOC 2004»
16 years 7 months ago
Approximating the cut-norm via Grothendieck's inequality
The cut-norm ||A||C of a real matrix A = (aij)iR,jS is the maximum, over all I R, J S of the quantity | iI,jJ aij|. This concept plays a major role in the design of efficient app...
Noga Alon, Assaf Naor