Sciweavers

386 search results - page 29 / 78
» R parallel - speeding up bioinformatics analysis with R
Sort
View
PDP
2008
IEEE
16 years 17 days ago
Just-In-Time Scheduling for Loop-based Speculative Parallelization
Scheduling for speculative parallelization is a problem that remained unsolved despite its importance. Simple methods such as Fixed-Size Chunking (FSC) need several ‘dry-runs’...
Diego R. Llanos Ferraris, David Orden, Belé...
CLUSTER
2003
IEEE
15 years 11 months ago
A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters
In this paper we analyze the I/O access patterns of a widely-used biological sequence search tool and implement two variations that employ parallel-I/O for data access based on PV...
Yifeng Zhu, Hong Jiang, Xiao Qin, David R. Swanson
IPPS
2008
IEEE
16 years 18 days ago
A plug-and-play model for evaluating wavefront computations on parallel architectures
This paper develops a plug-and-play reusable LogGP model that can be used to predict the runtime and scaling behavior of different MPI-based pipelined wavefront applications runni...
Gihan R. Mudalige, Mary K. Vernon, Stephen A. Jarv...
MICRO
1998
IEEE
108views Hardware» more  MICRO 1998»
15 years 10 months ago
Exploiting Instruction Level Parallelism in Geometry Processing for Three Dimensional Graphics Applications
Three dimensional (3D) graphics applications have become very important workloads running on today's computer systems. A cost-effective graphics solution is to perform geomet...
Chia-Lin Yang, Barton Sano, Alvin R. Lebeck
EUROPAR
2003
Springer
15 years 11 months ago
An Overview of the Blue Gene/L System Software Organization
Abstract. The Blue Gene/L supercomputer will use system-on-a-chip integration and a highly scalable cellular architecture. With 65,536 compute nodes, Blue Gene/L represents a new l...
George Almási, Ralph Bellofatto, José...