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BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
16 years 1 months ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uni...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara
DASFAA
2008
IEEE
109views Database» more  DASFAA 2008»
16 years 1 months ago
Bulk-Loading the ND-Tree in Non-ordered Discrete Data Spaces
Applications demanding multidimensional index structures for performing efficient similarity queries often involve a large amount of data. The conventional tuple-loading approach t...
Hyun-Jeong Seok, Gang Qian, Qiang Zhu, Alexander R...
DEXAW
2008
IEEE
252views Database» more  DEXAW 2008»
16 years 1 months ago
XML Tree Structure Compression
In an XML document a considerable fraction consists of markup, that is, begin and end-element tags describing the document’s tree structure. XML compression tools such as XMill ...
Sebastian Maneth, Nikolay Mihaylov, Sherif Sakr
ICDE
2008
IEEE
118views Database» more  ICDE 2008»
16 years 29 days ago
OntoNet: Scalable knowledge-based networking
Recent years have seen a proliferation of work on the Semantic Web, an initiative to enable intelligent agents to reason about and utilize World Wide Web content and services. Con...
Joseph B. Kopena, Boon Thau Loo
ICDE
2008
IEEE
139views Database» more  ICDE 2008»
16 years 29 days ago
Augmenting spatio-textual search with an infectious disease ontology
— A system is described that automatically categorizes and classifies infectious disease incidence reports by type and geographic location, to aid analysis by domain experts. It...
Michael D. Lieberman, Jagan Sankaranarayanan, Hana...
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