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BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
16 years 1 months ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uni...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara
DASFAA
2008
IEEE
109views Database» more  DASFAA 2008»
16 years 1 months ago
Bulk-Loading the ND-Tree in Non-ordered Discrete Data Spaces
Applications demanding multidimensional index structures for performing efficient similarity queries often involve a large amount of data. The conventional tuple-loading approach t...
Hyun-Jeong Seok, Gang Qian, Qiang Zhu, Alexander R...
ICDE
2008
IEEE
141views Database» more  ICDE 2008»
16 years 1 months ago
Provenance-aware secure networks
Network accountability and forensic analysis have become increasingly important, as a means of performing network diagnostics, identifying malicious nodes, enforcing trust managem...
Wenchao Zhou, Eric Cronin, Boon Thau Loo
ICDE
2008
IEEE
139views Database» more  ICDE 2008»
16 years 1 months ago
Augmenting spatio-textual search with an infectious disease ontology
— A system is described that automatically categorizes and classifies infectious disease incidence reports by type and geographic location, to aid analysis by domain experts. It...
Michael D. Lieberman, Jagan Sankaranarayanan, Hana...
SISAP
2008
IEEE
115views Data Mining» more  SISAP 2008»
16 years 1 months ago
A Dynamic Pivot Selection Technique for Similarity Search
All pivot-based algorithms for similarity search use a set of reference points called pivots. The pivot-based search algorithm precomputes some distances to these reference points...
Benjamin Bustos, Oscar Pedreira, Nieves R. Brisabo...
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