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BMCBI
2010
135views more  BMCBI 2010»
15 years 7 months ago
A classification approach for genotyping viral sequences based on multidimensional scaling and linear discriminant analysis
Background: Accurate classification into genotypes is critical in understanding evolution of divergent viruses. Here we report a new approach, MuLDAS, which classifies a query seq...
Ji Woong Kim, Yongju Ahn, Kichan Lee, Sung-Hee Par...
BMCBI
2006
109views more  BMCBI 2006»
15 years 6 months ago
A computational approach to discovering the functions of bacterial phytochromes by analysis of homolog distributions
Background: Phytochromes are photoreceptors, discovered in plants, that control a wide variety of developmental processes. They have also been found in bacteria and fungi, but for...
Tilman Lamparter
230
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BMCBI
2004
106views more  BMCBI 2004»
15 years 6 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...
VLDB
2002
ACM
154views Database» more  VLDB 2002»
15 years 6 months ago
I/O-Conscious Data Preparation for Large-Scale Web Search Engines
Given that commercial search engines cover billions of web pages, efficiently managing the corresponding volumes of disk-resident data needed to answer user queries quickly is a f...
Maxim Lifantsev, Tzi-cker Chiueh
NAR
2007
111views more  NAR 2007»
15 years 6 months ago
Michigan Molecular Interactions (MiMI): putting the jigsaw puzzle together
Protein interaction data exists in a number of repositories. Each repository has its own data format, molecule identifier and supplementary information. Michigan Molecular Interac...
Magesh Jayapandian, Adriane Chapman, V. Glenn Tarc...
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