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BMCBI
2011
14 years 10 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
BMCBI
2008
150views more  BMCBI 2008»
15 years 6 months ago
Natural Language Processing in aid of FlyBase curators
Background: Despite increasing interest in applying Natural Language Processing (NLP) to biomedical text, whether this technology can facilitate tasks such as database curation re...
Nikiforos Karamanis, Ruth Seal, Ian Lewin, Peter M...
200
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IPM
2008
141views more  IPM 2008»
15 years 6 months ago
Towards a unified approach to document similarity search using manifold-ranking of blocks
Document similarity search (i.e. query by example) aims to retrieve a ranked list of documents similar to a query document in a text corpus or on the Web. Most existing approaches...
Xiaojun Wan, Jianwu Yang, Jianguo Xiao
INFOCOM
2006
IEEE
16 years 20 days ago
Performance of Full Text Search in Structured and Unstructured Peer-to-Peer Systems
— While structured P2P systems (such as DHTs) are often regarded as an improvement over unstructured P2P systems (such as super-peer networks) in terms of routing efficiency, it...
Yong Yang, Rocky Dunlap, Mike Rexroad, Brian F. Co...
DBVIS
1993
101views Database» more  DBVIS 1993»
15 years 10 months ago
Using Visualization to Support Data Mining of Large Existing Databases
In this paper, we present ideas how visualization technology can be used to improve the difficult process of querying very large databases. With our VisDB system, we try to provid...
Daniel A. Keim, Hans-Peter Kriegel