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CSB
2004
IEEE
152views Bioinformatics» more  CSB 2004»
15 years 10 months ago
EcMLST: An Online Database for Multi Locus Sequence Typing of Pathogenic Escherichia coli
In order to provide a portable and accurate typing system for the unambiguous characterization of pathogenic Escherichia coli isolates to the scientific community, we have constru...
Weihong Qi, David W. Lacher, Alyssa C. Bumbaugh, K...
ICFP
2010
ACM
15 years 7 months ago
Bidirectionalizing graph transformations
Bidirectional transformations provide a novel mechanism for synchronizing and maintaining the consistency of information between input and output. Despite many promising results o...
Soichiro Hidaka, Zhenjiang Hu, Kazuhiro Inaba, Hir...
BMCBI
2007
176views more  BMCBI 2007»
15 years 6 months ago
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications
Background: Information resources on the World Wide Web play an indispensable role in modern biology. But integrating data from multiple sources is often encumbered by the need to...
J. Christopher Bare, Paul T. Shannon, Amy K. Schmi...
BMCBI
2006
115views more  BMCBI 2006»
15 years 6 months ago
AgdbNet - antigen sequence database software for bacterial typing
Background: Bacterial typing schemes based on the sequences of genes encoding surface antigens require databases that provide a uniform, curated, and widely accepted nomenclature ...
Keith A. Jolley, Martin C. J. Maiden
BMCBI
2004
139views more  BMCBI 2004»
15 years 6 months ago
mlstdbNet - distributed multi-locus sequence typing (MLST) databases
Background: Multi-locus sequence typing (MLST) is a method of typing that facilitates the discrimination of microbial isolates by comparing the sequences of housekeeping gene frag...
Keith A. Jolley, Man-Suen Chan, Martin C. J. Maide...