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BMCBI
2010
175views more  BMCBI 2010»
15 years 7 months ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng
BMCBI
2008
138views more  BMCBI 2008»
15 years 7 months ago
Comparative analyses of bidirectional promoters in vertebrates
Background: Orthologous genes with deep phylogenetic histories are likely to retain similar regulatory features. In this report we utilize orthology assignments for pairs of genes...
Mary Qu Yang, James Taylor, Laura Elnitski
CORR
2008
Springer
107views Education» more  CORR 2008»
15 years 7 months ago
Our Brothers' Keepers: Secure Routing with High Performance
The Trinity [1] spam classification system is based on a distributed hash table that is implemented using a structured peer-to-peer overlay. Such an overlay must be capable of proc...
Alex Brodsky, Scott Lindenberg
BMCBI
2007
124views more  BMCBI 2007»
15 years 6 months ago
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
Background: Clustered Regularly Interspaced Palindromic Repeats (CRISPRs) are a novel type of direct repeat found in a wide range of bacteria and archaea. CRISPRs are beginning to...
Charles Bland, Teresa L. Ramsey, Fareedah Sabree, ...
CSL
2007
Springer
15 years 6 months ago
Soft indexing of speech content for search in spoken documents
The paper presents the Position Specific Posterior Lattice (PSPL), a novel lossy representation of automatic speech recognition lattices that naturally lends itself to efficient ...
Ciprian Chelba, Jorge Silva, Alex Acero