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RECOMB
2005
Springer
16 years 7 months ago
Lower Bounds for Maximum Parsimony with Gene Order Data
Abstract. In this paper, we study lower bound techniques for branchand-bound algorithms for maximum parsimony, with a focus on gene order data. We give a simple O(n3 ) time dynamic...
Abraham Bachrach, Kevin Chen, Chris Harrelson, Rad...
220
Voted
RTSS
2005
IEEE
16 years 8 days ago
WCET Centric Data Allocation to Scratchpad Memory
Scratchpad memory is a popular choice for on-chip storage in real-time embedded systems. The allocation of code/data to scratchpad memory is performed at compile time leading to p...
Vivy Suhendra, Tulika Mitra, Abhik Roychoudhury, T...
168
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PPOPP
2003
ACM
15 years 12 months ago
The design and implementation of a parallel array operator for the arbitrary remapping of data
Gather and scatter are data redistribution functions of longstanding importance to high performance computing. In this paper, we present a highly-general array operator with power...
Steven J. Deitz, Bradford L. Chamberlain, Sung-Eun...
PDP
2002
IEEE
15 years 11 months ago
The CDAG: A Data Structure for Automatic Parallelization for a Multithreaded Architecture
Despite the explosive new interest in Distributed Computing, bringing software — particularly legacy software — to parallel platforms remains a daunting task. The Self Distrib...
Bernd Klauer, Frank Eschmann, Ronald Moore, Klaus ...
CF
2009
ACM
15 years 11 months ago
Data parallel acceleration of decision support queries using Cell/BE and GPUs
Decision Support System (DSS) workloads are known to be one of the most time-consuming database workloads that processes large data sets. Traditionally, DSS queries have been acce...
Pedro Trancoso, Despo Othonos, Artemakis Artemiou