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TCBB
2008
122views more  TCBB 2008»
15 years 6 months ago
Mixed Integer Linear Programming for Maximum-Parsimony Phylogeny Inference
Reconstruction of phylogenetic trees is a fundamental problem in computational biology. While excellent heuristic methods are available for many variants of this problem, new adva...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
JCB
2000
137views more  JCB 2000»
15 years 6 months ago
NOTUNG: A Program for Dating Gene Duplications and Optimizing Gene Family Trees
Large scale gene duplication is a major force driving the evolution of genetic functional innovation. Whole genome duplications are widely believed to have played an important rol...
Kevin Chen, Dannie Durand, Martin Farach-Colton

Book
407views
17 years 2 months ago
Java Gently
"Java Gently teaches the reader how to program and how to do it in the best possible style in Java. In the process, it details the fundamental structures of the Java 2 languag...
Judy Bishop
POS
1994
Springer
15 years 10 months ago
Using C as a Compiler Target Language for Native Code Generation in Persistent Systems
Persistent programming languages exhibit several requirements that affect the generation of native code, namely: garbage collection; arbitrary persistence of code, data and proces...
S. J. Bushell, Alan Dearle, Alfred L. Brown, Franc...
HASKELL
2007
ACM
15 years 10 months ago
A functional-logic library for wired
We develop a Haskell library for functional-logic programming, motivated by the implementation of Wired, a relational embedded domain-specific language for describing and analysin...
Matthew Naylor, Emil Axelsson, Colin Runciman