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SCFBM
2008
151views more  SCFBM 2008»
15 years 5 months ago
Wndchrm - an open source utility for biological image analysis
Background: Biological imaging is an emerging field, covering a wide range of applications in biological and clinical research. However, while machinery for automated experimentin...
Lior Shamir, Nikita Orlov, D. Mark Eckley, Tomasz ...
BMCBI
2011
15 years 1 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
POPL
2008
ACM
16 years 6 months ago
Generating precise and concise procedure summaries
We present a framework for generating procedure summaries that are precise -- applying the summary in a given context yields the same result as re-analyzing the procedure in that ...
Greta Yorsh, Eran Yahav, Satish Chandra
ICS
2009
Tsinghua U.
16 years 28 days ago
High-performance CUDA kernel execution on FPGAs
In this work, we propose a new FPGA design flow that combines the CUDA programming model from Nvidia with the state of the art high-level synthesis tool AutoPilot from AutoESL, to...
Alexandros Papakonstantinou, Karthik Gururaj, John...
ECBS
2006
IEEE
158views Hardware» more  ECBS 2006»
16 years 7 days ago
Automated Translation of C/C++ Models into a Synchronous Formalism
For complex systems that are reusing intellectual property components, functional and compositional design correctness are an important part of the design process. Common system l...
Hamoudi Kalla, Jean-Pierre Talpin, David Berner, L...