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BMCBI
2010
109views more  BMCBI 2010»
15 years 6 months ago
FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
Background: Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. Th...
Stephanie Zierke, Jason D. Bakos
CG
2008
Springer
15 years 6 months ago
Parallel reflective symmetry transformation for volume data
Many volume data possess symmetric features that can be clearly observed, for example, those existing in diffusion tensor image data sets. The exploitations of symmetries for volu...
Yuan Hong, Han-Wei Shen
ALGORITHMICA
2006
163views more  ALGORITHMICA 2006»
15 years 6 months ago
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines
Phylogenetic analysis is an area of computational biology concerned with the reconstruction of evolutionary relationships between organisms, genes, and gene families. Maximum likel...
Thomas M. Keane, Andrew J. Page, Thomas J. Naughto...
FGCS
2008
127views more  FGCS 2008»
15 years 6 months ago
Monte Carlo methods for matrix computations on the grid
Many scientific and engineering applications involve inverting large matrices or solving systems of linear algebraic equations. Solving these problems with proven algorithms for d...
Simon Branford, Cihan Sahin, Ashish Thandavan, Chr...
DPD
2006
98views more  DPD 2006»
15 years 6 months ago
GRACE-based joins on active storage devices
Contemporary long-term storage devices feature powerful embedded processors and sizeable memory buffers. Active Storage Devices (ASD) is the hard disk technology that makes use of ...
Vassilis Stoumpos, Alex Delis
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