We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao,...
Consider a convex set P in IRd and a piecewise polynomial concave function F: P IR. Let A be an algorithm that given a point x IRd computes F(x) if x P, or returns a concave po...
In this paper we look at combining and compressing a set of workflows, such that computation can be minimized. In this context, we look at two novel theoretical problems with appl...
Dhrubajyoti Saha, Abhishek Samanta, Smruti R. Sara...
Given a rectangular boundary partitioned into rectangles, the Minimum-Length Corridor (MLC-R) problem consists of finding a corridor of least total length. A corridor is a set of ...
Modern combinational equivalence checking (CEC) engines are complicated programs which are difficult to verify. In this paper we show how a modern CEC engine can be modified to pr...
Satrajit Chatterjee, Alan Mishchenko, Robert K. Br...