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BMCBI
2007
114views more  BMCBI 2007»
15 years 6 months ago
Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome
Background: The structure annotation of a genome is based either on ab initio methodologies or on similaritiy searches versus molecules that have been already annotated. Ab initio...
Nunzio D'Agostino, Alessandra Traini, Luigi Frusci...
JCB
2008
159views more  JCB 2008»
15 years 6 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
JMLR
2006
85views more  JMLR 2006»
15 years 6 months ago
Streamwise Feature Selection
In streamwise feature selection, new features are sequentially considered for addition to a predictive model. When the space of potential features is large, streamwise feature sel...
Jing Zhou, Dean P. Foster, Robert A. Stine, Lyle H...
NAR
2008
175views more  NAR 2008»
15 years 6 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
NAR
2006
170views more  NAR 2006»
15 years 6 months ago
The UCSC Genome Browser Database: update 2006
The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major m...
Angela S. Hinrichs, Donna Karolchik, Robert Baerts...