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BMCBI
2006
137views more  BMCBI 2006»
15 years 6 months ago
INTEGRATOR: interactive graphical search of large protein interactomes over the Web
Background: The rapid growth of protein interactome data has elevated the necessity and importance of network analysis tools. However, unlike pure text data, network search spaces...
Aaron N. Chang, Jason McDermott, Zachary Frazier, ...
WWW
2004
ACM
16 years 6 months ago
What's new on the web?: the evolution of the web from a search engine perspective
We seek to gain improved insight into how Web search engines should cope with the evolving Web, in an attempt to provide users with the most up-to-date results possible. For this ...
Alexandros Ntoulas, Junghoo Cho, Christopher Olsto...
BMCBI
2008
130views more  BMCBI 2008»
15 years 6 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BMCBI
2007
133views more  BMCBI 2007»
15 years 6 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
SIGIR
2006
ACM
16 years 7 hour ago
Improving the estimation of relevance models using large external corpora
Information retrieval algorithms leverage various collection statistics to improve performance. Because these statistics are often computed on a relatively small evaluation corpus...
Fernando Diaz, Donald Metzler