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BIOINFORMATICS
2011
14 years 10 months ago
RINQ: Reference-based Indexing for Network Queries
We consider the problem of similarity queries in biological network databases. Given a database of networks, similarity query returns all the database networks whose similarity (i...
Günhan Gülsoy, Tamer Kahveci
ISCA
1995
IEEE
109views Hardware» more  ISCA 1995»
15 years 10 months ago
Next Cache Line and Set Prediction
Accurate instruction fetch and branch prediction is increasingly important on today’s wide-issue architectures. Fetch prediction is the process of determining the next instructi...
Brad Calder, Dirk Grunwald
164
Voted
BMCBI
2006
74views more  BMCBI 2006»
15 years 7 months ago
An unsupervised classification scheme for improving predictions of prokaryotic TIS
Background: Although it is not difficult for state-of-the-art gene finders to identify coding regions in prokaryotic genomes, exact prediction of the corresponding translation ini...
Maike Tech, Peter Meinicke
270
Voted
BMCBI
2006
169views more  BMCBI 2006»
15 years 7 months ago
Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction
Background: The accomplishment of the various genome sequencing projects resulted in accumulation of massive amount of gene sequence information. This calls for a large-scale comp...
Zhengdeng Lei, Yang Dai
BIOINFORMATICS
2000
149views more  BIOINFORMATICS 2000»
15 years 6 months ago
MaxSub: an automated measure for the assessment of protein structure prediction quality
Motivation: Evaluating the accuracy of predicted models is critical for assessing structure prediction methods. Because this problem is not trivial, a large number of different as...
Naomi Siew, Arne Elofsson, Leszek Rychlewski, Dani...