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BMCBI
2004
200views more  BMCBI 2004»
15 years 6 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...
BMCBI
2011
14 years 10 months ago
Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform
Background: Copy number data are routinely being extracted from genome-wide association study chips using a variety of software. We empirically evaluated and compared four freely-...
Jeanette E. Eckel-Passow, Elizabeth J. Atkinson, S...
HPCA
2006
IEEE
16 years 6 months ago
Retention-aware placement in DRAM (RAPID): software methods for quasi-non-volatile DRAM
Measurements of an off-the-shelf DRAM chip confirm that different cells retain information for different amounts of time. This result extends to DRAM rows, or pages (retention tim...
Ravi K. Venkatesan, Stephen Herr, Eric Rotenberg
ISCA
2007
IEEE
146views Hardware» more  ISCA 2007»
16 years 24 days ago
Hardware atomicity for reliable software speculation
Speculative compiler optimizations are effective in improving both single-thread performance and reducing power consumption, but their implementation introduces significant compl...
Naveen Neelakantam, Ravi Rajwar, Suresh Srinivas, ...
BMCBI
2007
137views more  BMCBI 2007»
15 years 6 months ago
GEVALT: An integrated software tool for genotype analysis
Background: Genotype information generated by individual and international efforts carries the promise of revolutionizing disease studies and the association of phenotypes with al...
Ofir Davidovich, Gad Kimmel, Ron Shamir