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» Perspectives on Systems Biology
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2009
IEEE
16 years 1 months ago
A Nonmonotonic Logical Approach for Modelling and Revising Metabolic Networks
—This paper describes a new logic-based approach for representing and reasoning about metabolic networks. First it shows how biological pathways can be elegantly represented in a...
Oliver Ray, Ken E. Whelan, Ross D. King
IPPS
2009
IEEE
16 years 1 months ago
Accelerating leukocyte tracking using CUDA: A case study in leveraging manycore coprocessors
The availability of easily programmable manycore CPUs and GPUs has motivated investigations into how to best exploit their tremendous computational power for scientific computing...
Michael Boyer, David Tarjan, Scott T. Acton, Kevin...
CMSB
2009
Springer
16 years 1 months ago
Probabilistic Approximations of Signaling Pathway Dynamics
Systems of ordinary differential equations (ODEs) are often used to model the dynamics of complex biological pathways. We construct a discrete state model as a probabilistic appro...
Bing Liu, P. S. Thiagarajan, David Hsu
CMSB
2009
Springer
16 years 1 months ago
Equivalence and Discretisation in Bio-PEPA
Bio-PEPA is a process algebra for modelling biological systems. An important aspect of Bio-PEPA is the ability it provides to discretise concentrations resulting in a smaller, more...
Vashti Galpin, Jane Hillston
ICVS
2009
Springer
16 years 1 months ago
Saliency-Based Obstacle Detection and Ground-Plane Estimation for Off-Road Vehicles
Abstract. Due to stringing time constraints, saliency models are becoming popular tools for building situated robotic systems requiring, for instance, object recognition and vision...
Pedro Santana, Magno Guedes, Luís Correia, ...