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BMCBI
2004
173views more  BMCBI 2004»
15 years 6 months ago
d-matrix - database exploration, visualization and analysis
Background: Motivated by a biomedical database set up by our group, we aimed to develop a generic database front-end with embedded knowledge discovery and analysis features. A maj...
Dominik Seelow, Raffaello Galli, Siegrun Mebus, Ha...
BMCBI
2010
108views more  BMCBI 2010»
15 years 6 months ago
Error, reproducibility and sensitivity : a pipeline for data processing of Agilent oligonucleotide expression arrays
Background: Expression microarrays are increasingly used to obtain large scale transcriptomic information on a wide range of biological samples. Nevertheless, there is still much ...
Benjamin Chain, Helen Bowen, John Hammond, Wilfrie...
BMCBI
2006
131views more  BMCBI 2006»
15 years 6 months ago
The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison
Background: Analysis of DNA microarray data takes as input spot intensity measurements from scanner software and returns differential expression of genes between two conditions, t...
Allan A. Sioson, Shrinivasrao P. Mane, Pinghua Li,...
PODS
2008
ACM
159views Database» more  PODS 2008»
16 years 6 months ago
Approximation algorithms for clustering uncertain data
There is an increasing quantity of data with uncertainty arising from applications such as sensor network measurements, record linkage, and as output of mining algorithms. This un...
Graham Cormode, Andrew McGregor
BMCBI
2010
112views more  BMCBI 2010»
15 years 6 months ago
The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datas
Background: Standardization of analytical approaches and reporting methods via community-wide collaboration can work synergistically with web-tool development to result in rapid c...
Adam J. Carroll, Murray R. Badger, A. Harvey Milla...