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POPL
2010
ACM
15 years 9 months ago
Programming with angelic nondeterminism
Angelic nondeterminism can play an important role in program development. It simplifies specifications, for example in deriving programs with a refinement calculus; it is the form...
Rastislav Bodík, Satish Chandra, Joel Galen...
DAC
2008
ACM
15 years 8 months ago
Application mapping for chip multiprocessors
The problem attacked in this paper is one of automatically mapping an application onto a Network-on-Chip (NoC) based chip multiprocessor (CMP) architecture in a locality-aware fas...
Guangyu Chen, Feihui Li, Seung Woo Son, Mahmut T. ...
BMCBI
2010
175views more  BMCBI 2010»
15 years 6 months ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng
BMCBI
2010
147views more  BMCBI 2010»
15 years 6 months ago
Automatic detection of anchor points for multiple sequence alignment
Background: Determining beforehand specific positions to align (anchor points) has proved valuable for the accuracy of automated multiple sequence alignment (MSA) software. This f...
Florian Pitschi, Claudine Devauchelle, Eduardo Cor...
BMCBI
2010
128views more  BMCBI 2010»
15 years 6 months ago
VIGOR, an annotation program for small viral genomes
Background: The decrease in cost for sequencing and improvement in technologies has made it easier and more common for the re-sequencing of large genomes as well as parallel seque...
Shiliang Wang, Jaideep P. Sundaram, David Spiro
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