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159
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BMCBI
2006
15 years 6 months ago
2006
Background: The neighbor-joining method by Saitou and Nei is a widely used method for constructing phylogenetic trees. The formulation of the method gives rise to a canonical (n3)...
167
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CCGRID
2006
IEEE
16 years 20 days ago
2006
IEEE
Grid computing is becoming the natural way to aggregate and share large sets of heterogeneous resources. With the infrastructure becoming ready for the challenge, current grid dev...
208
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JCPHY
2011
14 years 9 months ago
2011
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
157
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ICPP
1994
IEEE
15 years 10 months ago
1994
IEEE
Shared memory in a parallel computer provides prowith the valuable abstraction of a shared address space--through which any part of a computation can access any datum. Although un...
161
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ICPP
2007
IEEE
16 years 28 days ago
2007
IEEE
The productivity of HPC system is determined not only by their performance, but also by their reliability. The conventional method to limit the impact of failures is checkpointing...