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BMCBI
2006
125views more  BMCBI 2006»
15 years 6 months ago
Automated functional classification of experimental and predicted protein structures
Background: Proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural si...
Kai Wang, Ram Samudrala
BMCBI
2004
122views more  BMCBI 2004»
15 years 6 months ago
A comprehensive comparison of comparative RNA structure prediction approaches
Background: An increasing number of researchers have released novel RNA structure analysis and prediction algorithms for comparative approaches to structure prediction. Yet, indep...
Paul P. Gardner, Robert Giegerich
BIBM
2010
IEEE
158views Bioinformatics» more  BIBM 2010»
15 years 4 months ago
Protein-protein interaction prediction via Collective Matrix Factorization
Abstract--Protein-protein interactions (PPI) play an important role in cellular processes and metabolic processes within a cell. An important task is to determine the existence of ...
Qian Xu, Evan Wei Xiang, Qiang Yang
HPCA
2005
IEEE
16 years 7 months ago
Predicting Inter-Thread Cache Contention on a Chip Multi-Processor Architecture
This paper studies the impact of L2 cache sharing on threads that simultaneously share the cache, on a Chip Multi-Processor (CMP) architecture. Cache sharing impacts threads non-u...
Dhruba Chandra, Fei Guo, Seongbeom Kim, Yan Solihi...
ICSE
2005
IEEE-ACM
16 years 6 months ago
Use of relative code churn measures to predict system defect density
Software systems evolve over time due to changes in requirements, optimization of code, fixes for security and reliability bugs etc. Code churn, which measures the changes made to...
Nachiappan Nagappan, Thomas Ball