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GI
2009
Springer
15 years 10 months ago
Massively-Parallel Simulation of Biochemical Systems
: Understanding biological evolution prompts for a detailed understanding of the realized phenotype. Biochemical and gene regulatory dynamics are a cornerstone for the physiology o...
Jens Ackermann, Paul Baecher, Thorsten Franzel, Mi...
GECCO
2005
Springer
180views Optimization» more  GECCO 2005»
15 years 11 months ago
Inference of gene regulatory networks using s-system and differential evolution
In this work we present an improved evolutionary method for inferring S-system model of genetic networks from the time series data of gene expression. We employed Differential Ev...
Nasimul Noman, Hitoshi Iba
IWANN
2009
Springer
16 years 16 days ago
Development of Neural Network Structure with Biological Mechanisms
We present an evolving neural network model in which synapses appear and disappear stochastically according to bio-inspired probabilities. These are in general nonlinear functions ...
Samuel Johnson, Joaquín Marro, Jorge F. Mej...
TFS
2010
152views Education» more  TFS 2010»
15 years 21 days ago
Robust Optimal Reference-Tracking Design Method for Stochastic Synthetic Biology Systems: T-S Fuzzy Approach
At present, the development in the nascent field of synthetic gene networks is still difficult. Most newly created gene networks are nonfunctioning due to intrinsic parameter fluct...
Bor-Sen Chen, Chih-Hung Wu
BMCBI
2007
113views more  BMCBI 2007»
15 years 6 months ago
Learning biophysically-motivated parameters for alpha helix prediction
Background: Our goal is to develop a state-of-the-art protein secondary structure predictor, with an intuitive and biophysically-motivated energy model. We treat structure predict...
Blaise Gassend, Charles W. O'Donnell, William Thie...