The IBM Cyclops-64 (C64) chip employs a multithreaded architecture that integrates a large number of hardware thread units on a single chip. A cellular supercomputer is being deve...
We developed a multithreaded parallel implementation of a sequence alignment algorithm that is able to align whole genomes with reliable output and reasonable cost. This paper pres...
Juan del Cuvillo, Xinmin Tian, Guang R. Gao, Milin...
Abstract. Recent times have seen an explosive growth in the availability of various kinds of data. It has resulted in an unprecedented opportunity to develop automated data-driven ...
Supercomputer performance is highly dependent on its interconnection subsystem design. In this paper we study how di erent architectural approaches for router design impact into s...
Inference of phylogenetic trees comprising hundreds or even thousands of organisms based on the maximum likelihood method is computationally extremely expensive. In previous work,...