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SPAA
2009
ACM
16 years 6 months ago
Towards transactional memory semantics for C++
Transactional memory (TM) eliminates many problems associated with lock-based synchronization. Over recent years, much progress has been made in software and hardware implementati...
Tatiana Shpeisman, Ali-Reza Adl-Tabatabai, Robert ...
ASPLOS
2000
ACM
15 years 10 months ago
An Analysis of Operating System Behavior on a Simultaneous Multithreaded Architecture
This paper presents the first analysis of operating system execution on a simultaneous multithreaded (SMT) processor. While SMT has been studied extensively over the past 6 years,...
Joshua Redstone, Susan J. Eggers, Henry M. Levy
BMCBI
2010
198views more  BMCBI 2010»
15 years 6 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
SIAMREV
2010
174views more  SIAMREV 2010»
15 years 18 days ago
Guaranteed Minimum-Rank Solutions of Linear Matrix Equations via Nuclear Norm Minimization
The affine rank minimization problem consists of finding a matrix of minimum rank that satisfies a given system of linear equality constraints. Such problems have appeared in the ...
Benjamin Recht, Maryam Fazel, Pablo A. Parrilo
BMCBI
2011
14 years 9 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes