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IPPS
2003
IEEE
15 years 12 months ago
A Fast Algorithm for the Exhaustive Analysis of 12-Nucleotide-Long DNA Sequences. Applications to Human Genomics
We have developed a new algorithm that allows the exhaustive determination of words of up to 12 nucleotides in DNA sequences. It is fast enough as to be used at a genomic scale ru...
Vicente Arnau, Ignacio Marín
IPPS
2003
IEEE
15 years 12 months ago
Performance and Overhead in a Hybrid Reconfigurable Computer
In this paper, we overview general hardware architecture and a programming model of SRC-6ETM reconfigurable computers, and compare the performance of the SRC-6E machine vs. IntelĀ...
Osman Devrim Fidanci, Daniel S. Poznanovic, Kris G...
IPPS
2003
IEEE
15 years 12 months ago
Benchmark and Framework for Encouraging Research on Multi-Threaded Testing Tools
A problem that has been getting prominence in testing is that of looking for intermittent bugs. Multi-threaded code is becoming very common, mostly on the server side. As there is...
Klaus Havelund, Scott D. Stoller, Shmuel Ur
IPPS
2003
IEEE
15 years 12 months ago
Wrapping Legacy Codes for Grid-Based Applications
This paper describes a process for the semi-automatic conversion of numerical and scientific routines written in the C programming language into Triana-based computational servic...
Yan Huang, Ian Taylor, David W. Walker, Robert Dav...
IPPS
2003
IEEE
15 years 12 months ago
Expresso and Chips: Creating a Next Generation Microarray Experiment Management System
Expresso is an experiment management system that is designed to assist biologists in planning, executing, and interpreting microarray experiments. It serves as a unifying framewor...
Allan A. Sioson, Jonathan I. Watkinson, Cecilia Va...