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CEC
2008
IEEE
16 years 1 months ago
Evolving GeneChip correlation predictors on parallel graphics hardware
—A GPU is used to datamine five million correlations between probes within Affymetrix HG-U133A probesets across 6685 human tissue samples from NCBI’s GEO database. These conco...
William B. Langdon
GECCO
2008
Springer
143views Optimization» more  GECCO 2008»
15 years 7 months ago
A parallel evolutionary algorithm for unconstrained binary quadratic problems
In this paper an island model is described for the unconstrained Binary Quadratic Problem (BQP), which can be used with up to 2500 binary variables. Our island model uses a master...
István Borgulya
PC
2010
177views Management» more  PC 2010»
15 years 5 months ago
Parallel graph component labelling with GPUs and CUDA
Graph component labelling, which is a subset of the general graph colouring problem, is a computationally expensive operation that is of importance in many applications and simula...
Kenneth A. Hawick, Arno Leist, Daniel P. Playne
ISPAN
1997
IEEE
15 years 11 months ago
CASS: an efficient task management system for distributed memory architectures
The thesis of this research is that the task of exposing the parallelism in a given application should be left to the algorithm designer, who has intimate knowledge of the applica...
Jing-Chiou Liou, Michael A. Palis
IPPS
2005
IEEE
16 years 8 days ago
A Case Study on Pattern-Based Systems for High Performance Computational Biology
Computational biology research is now faced with the burgeoning number of genome data. The rigorous postprocessing of this data requires an increased role for high performance com...
Weiguo Liu, Bertil Schmidt