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HPCA
2005
IEEE
16 years 7 months ago
Scatter-Add in Data Parallel Architectures
Many important applications exhibit large amounts of data parallelism, and modern computer systems are designed to take advantage of it. While much of the computation in the multi...
Jung Ho Ahn, Mattan Erez, William J. Dally
IPPS
2009
IEEE
16 years 1 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
APPT
2009
Springer
16 years 1 months ago
Computational Performance of a Parallelized Three-Dimensional High-Order Spectral Element Toolbox
In this paper, a comprehensive performance review of an MPI-based high-order three-dimensional spectral element method C++ toolbox is presented. The focus is put on the performance...
Christoph Bosshard, Roland Bouffanais, Christian C...
IPPS
2007
IEEE
16 years 29 days ago
Coarse-grain Parallel Execution for 2-dimensional PDE Problems
This paper presents a new approach for the execution of coarse-grain (tiled) parallel SPMD code for applications derived from the explicit discretization of 2-dimensional PDE prob...
Georgios I. Goumas, Nikolaos Drosinos, Vasileios K...
IPPS
2007
IEEE
16 years 29 days ago
ParalleX: A Study of A New Parallel Computation Model
This paper proposes the study of a new computation model that attempts to address the underlying sources of performance degradation (e.g. latency, overhead, and starvation) and th...
Guang R. Gao, Thomas L. Sterling, Rick Stevens, Ma...