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PC
2010
145views Management» more  PC 2010»
15 years 4 months ago
GPU computing with Kaczmarz's and other iterative algorithms for linear systems
The graphics processing unit (GPU) is used to solve large linear systems derived from partial differential equations. The differential equations studied are strongly convection-...
Joseph M. Elble, Nikolaos V. Sahinidis, Panagiotis...
BIBM
2010
IEEE
222views Bioinformatics» more  BIBM 2010»
15 years 4 months ago
CEO a cloud epistasis computing model in GWAS
The 1000 Genome project has made available a large number of single nucleotide polymorphisms (SNPs) for genome-wide association studies (GWAS). However, the large number of SNPs ha...
Zhengkui Wang, Yue Wang, Kian-Lee Tan, Limsoon Won...
PC
2011
318views Management» more  PC 2011»
15 years 1 months ago
High-performance message-passing over generic Ethernet hardware with Open-MX
In the last decade, cluster computing has become the most popular high-performance computing architecture. Although numerous technological innovations have been proposed to improv...
Brice Goglin
IPPS
2008
IEEE
16 years 24 days ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...
IPPS
2008
IEEE
16 years 24 days ago
Scaling alltoall collective on multi-core systems
MPI Alltoall is one of the most communication intense collective operation used in many parallel applications. Recently, the supercomputing arena has witnessed phenomenal growth o...
Rahul Kumar, Amith R. Mamidala, Dhabaleswar K. Pan...