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» P systems applications to systems biology
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ASM
2008
ASM
15 years 8 months ago
Using EventB to Create a Virtual Machine Instruction Set Architecture
A Virtual Machine (VM) is a program running on a conventional microprocessor that emulates the binary instruction set, registers, and memory space of an idealized computing machine...
Stephen Wright
BIOCOMP
2006
15 years 8 months ago
The Generalized Topological Overlap Matrix for Detecting Modules in Gene Networks
Systems biologic studies of gene and protein interaction networks have found that these networks are comprised of `modules' (groups of tightly interconnected nodes). Module i...
Andy M. Yip, Steve Horvath
BMCBI
2007
123views more  BMCBI 2007»
15 years 6 months ago
GO for gene documents
Annotating genes and their products with Gene Ontology codes is an important area of research. One approach for doing this is to use the information available about these genes in...
Padmini Srinivasan, Xin Ying Qiu
TITB
2002
142views more  TITB 2002»
15 years 6 months ago
Building a bioinformatics ontology using OIL
This paper describes the initial stages of building an ontology of bioinformatics and molecular biology. The conceptualisation is encoded using the Ontology Inference Layer (OIL),...
Robert Stevens, Carole A. Goble, Ian Horrocks, Sea...
JCC
2010
87views more  JCC 2010»
15 years 5 months ago
Crystal contacts as nature's docking solutions
The assumption that crystal contacts reflect natural macromolecular interactions makes a basis for many studies in structural biology. However, the crystal state may correspond t...
Evgeny B. Krissinel