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IPPS
2007
IEEE
16 years 1 months ago
A Comparative Study of Parallel Metaheuristics for Protein Structure Prediction on the Computational Grid
A comparative study of parallel metaheuristics executed in grid environments is proposed, having as case study a genetic algorithm, a simulated annealing algorithm and a random se...
Alexandru-Adrian Tantar, Nouredine Melab, El-Ghaza...
IPPS
2007
IEEE
16 years 1 months ago
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
Azzedine Boukerche, Jan Mendonca Correa, Alba Cris...
IPPS
2007
IEEE
16 years 1 months ago
Advanced Shortest Paths Algorithms on a Massively-Multithreaded Architecture
We present a study of multithreaded implementations of Thorup’s algorithm for solving the Single Source Shortest Path (SSSP) problem for undirected graphs. Our implementations l...
Joseph R. Crobak, Jonathan W. Berry, Kamesh Maddur...
IPPS
2007
IEEE
16 years 1 months ago
A Comprehensive Analysis of OpenMP Applications on Dual-Core Intel Xeon SMPs
Hybrid chip multithreaded SMPs present new challenges as well as new opportunities to maximize performance. Our intention is to discover the optimal operating configuration of suc...
Ryan E. Grant, Ahmad Afsahi
IPPS
2007
IEEE
16 years 1 months ago
Securing Grid Data Transfer Services with Active Network Portals
Widely available and utilized Grid servers are vulnerable to a variety of threats from Denial of Service (DoS) attacks, overloading caused by flash crowds, and compromised client ...
Onur Demir, Michael R. Head, Kanad Ghose, Madhusud...