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» On the distribution of eigenvalues of graphs
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KDD
2009
ACM
228views Data Mining» more  KDD 2009»
16 years 7 months ago
A generalized Co-HITS algorithm and its application to bipartite graphs
Recently many data types arising from data mining and Web search applications can be modeled as bipartite graphs. Examples include queries and URLs in query logs, and authors and ...
Hongbo Deng, Michael R. Lyu, Irwin King
RECOMB
2004
Springer
16 years 6 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
IEEEPACT
2003
IEEE
15 years 12 months ago
Constraint Graph Analysis of Multithreaded Programs
This paper presents a framework for analyzing the performance of multithreaded programs using a model called a constraint graph. We review previous constraint graph definitions fo...
Harold W. Cain, Mikko H. Lipasti, Ravi Nair
BIOINFORMATICS
2008
172views more  BIOINFORMATICS 2008»
15 years 6 months ago
Fitting a geometric graph to a protein-protein interaction network
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...
Desmond J. Higham, Marija Rasajski, Natasa Przulj
BMCBI
2005
120views more  BMCBI 2005»
15 years 6 months ago
SpectralNET - an application for spectral graph analysis and visualization
Background: Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks ...
Joshua J. Forman, Paul A. Clemons, Stuart L. Schre...