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» On the analysis of the (1 1) memetic algorithm
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WSDM
2009
ACM
187views Data Mining» more  WSDM 2009»
16 years 1 months ago
Speeding up algorithms on compressed web graphs
A variety of lossless compression schemes have been proposed to reduce the storage requirements of web graphs. One successful approach is virtual node compression [7], in which of...
Chinmay Karande, Kumar Chellapilla, Reid Andersen
UAI
2003
15 years 7 months ago
On the Convergence of Bound Optimization Algorithms
Many practitioners who use EM and related algorithms complain that they are sometimes slow. When does this happen, and what can be done about it? In this paper, we study the gener...
Ruslan Salakhutdinov, Sam T. Roweis, Zoubin Ghahra...
BMCBI
2006
119views more  BMCBI 2006»
15 years 6 months ago
Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
Background: The choice of probe set algorithms for expression summary in a GeneChip study has a great impact on subsequent gene expression data analysis. Spiked-in cRNAs with know...
Zihua Hu, Gail R. Willsky
BMCBI
2010
146views more  BMCBI 2010»
15 years 6 months ago
Genomic selection and complex trait prediction using a fast EM algorithm applied to genome-wide markers
Background: The information provided by dense genome-wide markers using high throughput technology is of considerable potential in human disease studies and livestock breeding pro...
Ross K. Shepherd, Theo H. E. Meuwissen, John A. Wo...
APBC
2004
123views Bioinformatics» more  APBC 2004»
15 years 7 months ago
Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
Joachim A. Hering, Peter R. Innocent, Parvez I. Ha...