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ACTA
2005
92views more  ACTA 2005»
15 years 6 months ago
Type-based information flow analysis for the pi-calculus
We propose a new type system for information flow analysis for the -calculus. As demonstrated by recent studies, information about whether each communication succeeds is important ...
Naoki Kobayashi
BMCBI
2005
212views more  BMCBI 2005»
15 years 6 months ago
PAGE: Parametric Analysis of Gene Set Enrichment
Background: Gene set enrichment analysis (GSEA) is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes i...
Seon-Young Kim, David J. Volsky
BMCBI
2005
110views more  BMCBI 2005»
15 years 6 months ago
Considerations when using the significance analysis of microarrays (SAM) algorithm
Background: Users of microarray technology typically strive to use universally acceptable data analysis strategies to determine significant expression changes in their experiments...
Ola Larsson, Claes Wahlestedt, James A. Timmons
JBI
2007
110views Bioinformatics» more  JBI 2007»
15 years 6 months ago
FreeViz - An intelligent multivariate visualization approach to explorative analysis of biomedical data
Visualization can largely improve biomedical data analysis. It plays a crucial role in explorative data analysis and may support various data mining tasks. The paper presents Free...
Janez Demsar, Gregor Leban, Blaz Zupan
BMCBI
2005
86views more  BMCBI 2005»
15 years 6 months ago
WebArray: an online platform for microarray data analysis
Background: Many cutting-edge microarray analysis tools and algorithms, including commonly used limma and affy packages in Bioconductor, need sophisticated knowledge of mathematic...
Xiaoqin Xia, Michael McClelland, Yipeng Wang