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» On the accuracy of language trees
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BMCBI
2007
95views more  BMCBI 2007»
15 years 6 months ago
Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices
Background: Protein-protein interactions are critical for cellular functions. Recently developed computational approaches for predicting protein-protein interactions utilize co-ev...
Roger A. Craig, Li Liao
ISBRA
2010
Springer
15 years 5 months ago
A Consensus Tree Approach for Reconstructing Human Evolutionary History and Detecting Population Substructure
The random accumulation of variations in the human genome over time implicitly encodes a history of how human populations have arisen, dispersed, and intermixed since we emerged as...
Ming-Chi Tsai, Guy E. Blelloch, R. Ravi, Russell S...
PLDI
2009
ACM
16 years 1 months ago
PetaBricks: a language and compiler for algorithmic choice
It is often impossible to obtain a one-size-fits-all solution for high performance algorithms when considering different choices for data distributions, parallelism, transformati...
Jason Ansel, Cy P. Chan, Yee Lok Wong, Marek Olsze...
BMCBI
2010
121views more  BMCBI 2010»
15 years 6 months ago
Reconstructing genome trees of prokaryotes using overlapping genes
Background: Overlapping genes (OGs) are defined as adjacent genes whose coding sequences overlap partially or entirely. In fact, they are ubiquitous in microbial genomes and more ...
Chih-Hsien Cheng, Chung-Han Yang, Hsien-Tai Chiu, ...
WWW
2006
ACM
16 years 7 months ago
Merging trees: file system and content integration
XML is the predominant format for representing structured information inside documents, but it stops at the level of files. This makes it hard to use XML-oriented tools to process...
Erik Wilde