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BMCBI
2005
67views more  BMCBI 2005»
15 years 6 months ago
Selecting additional tag SNPs for tolerating missing data in genotyping
Background: Recent studies have shown that the patterns of linkage disequilibrium observed in human populations have a block-like structure, and a small subset of SNPs (called tag...
Yao-Ting Huang, Kui Zhang, Ting Chen, Kun-Mao Chao
177
Voted
PVLDB
2008
154views more  PVLDB 2008»
15 years 6 months ago
Indexing land surface for efficient kNN query
The class of k Nearest Neighbor (kNN) queries is frequently used in geospatial applications. Many studies focus on processing kNN in Euclidean and road network spaces. Meanwhile, ...
Cyrus Shahabi, Lu-An Tang, Songhua Xing
BMCBI
2011
14 years 10 months ago
Improving pan-genome annotation using whole genome multiple alignment
Background: Rapid annotation and comparisons of genomes from multiple isolates (pan-genomes) is becoming commonplace due to advances in sequencing technology. Genome annotations c...
Samuel V. Angiuoli, Julie C. Dunning Hotopp, Steve...
GCB
2001
Springer
111views Biometrics» more  GCB 2001»
15 years 11 months ago
Approximate Bayesian Discrimination between Alternative DNA Mosaic Structures
: We derive an approximate Bayesian hypothesis test to discriminate between alternative mosaic structures of DNA sequence alignments, and test the viability of this approach on a s...
Dirk Husmeier, Frank Wright
CCCG
2009
15 years 7 months ago
Data Structures for Reporting Extension Violations in a Query Range
Design Rule Checking (DRC) in VLSI design involves checking if a given VLSI layout satisfies a given set of rules, and reporting the violations if any. We propose data structures ...
Ananda Swarup Das, Prosenjit Gupta, Kannan Srinath...