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» On the Structure of Low Sets
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BMCBI
2010
95views more  BMCBI 2010»
15 years 6 months ago
Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions
Background: Accurate evaluation and modelling of residue-residue interactions within and between proteins is a key aspect of computational structure prediction including homology ...
Vladimir Potapov, Mati Cohen, Yuval Inbar, Gideon ...
TC
2008
15 years 6 months ago
The Algebra of Connectors - Structuring Interaction in BIP
We provide an algebraic formalization of connectors in the BIP component framework. A connector relates a set of typed ports. Types are used to describe different modes of synchron...
Simon Bliudze, Joseph Sifakis
DATE
2002
IEEE
77views Hardware» more  DATE 2002»
15 years 11 months ago
An Optimal Algorithm for the Automatic Generation of March Tests
This paper presents an innovative algorithm for the automatic generation of March Tests. The proposed approach is able to generate an optimal March Test for an unconstrained set o...
Alfredo Benso, Stefano Di Carlo, Giorgio Di Natale...
CONEXT
2010
ACM
15 years 4 months ago
Scalable routing on flat names
We introduce a protocol which routes on flat, locationindependent identifiers with guaranteed scalability and low stretch. Our design builds on theoretical advances in the area of...
Ankit Singla, Brighten Godfrey, Kevin R. Fall, Gia...
ICML
2007
IEEE
16 years 7 months ago
Graph clustering with network structure indices
Graph clustering has become ubiquitous in the study of relational data sets. We examine two simple algorithms: a new graphical adaptation of the k-medoids algorithm and the Girvan...
Matthew J. Rattigan, Marc Maier, David Jensen