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NAR
2011
248views Computer Vision» more  NAR 2011»
14 years 9 months ago
NCBI GEO: archive for functional genomics data sets - 10 years on
A decade ago, the Gene Expression Omnibus (GEO) database was established at the National Center for Biotechnology Information (NCBI). The original objective of GEO was to serve as...
Tanya Barrett, Dennis B. Troup, Stephen E. Wilhite...
VISUALIZATION
2005
IEEE
16 years 9 days ago
Query-Driven Visualization of Large Data Sets
We present a practical and general-purpose approach to large and complex visual data analysis where visualization processing, rendering and subsequent human interpretation is cons...
Kurt Stockinger, John Shalf, Kesheng Wu, E. Wes Be...
FOCS
2004
IEEE
15 years 10 months ago
Triangulation and Embedding Using Small Sets of Beacons
Concurrent with recent theoretical interest in the problem of metric embedding, a growing body of research in the networking community has studied the distance matrix defined by n...
Jon M. Kleinberg, Aleksandrs Slivkins, Tom Wexler
BMCBI
2010
143views more  BMCBI 2010»
15 years 6 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
SODA
2008
ACM
109views Algorithms» more  SODA 2008»
15 years 8 months ago
Auctions for structured procurement
This paper considers a general setting for structured procurement and the problem a buyer faces in designing a procurement mechanism to maximize profit. This brings together two a...
Matthew Cary, Abraham D. Flaxman, Jason D. Hartlin...