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BMCBI
2010
142views more  BMCBI 2010»
15 years 6 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
BMCBI
2006
127views more  BMCBI 2006»
15 years 6 months ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...
COMGEO
2012
ACM
14 years 2 months ago
Point-set embeddings of plane 3-trees
A straight-line drawing of a plane graph G is a planar drawing of G, where each vertex is drawn as a point and each edge is drawn as a straight line segment. Given a set S of n poi...
Rahnuma Islam Nishat, Debajyoti Mondal, Md. Saidur...
WWW
2008
ACM
16 years 7 months ago
Recommending questions using the mdl-based tree cut model
The paper is concerned with the problem of question recommendation. Specifically, given a question as query, we are to retrieve and rank other questions according to their likelih...
Yunbo Cao, Huizhong Duan, Chin-Yew Lin, Yong Yu, H...
VLDB
2002
ACM
133views Database» more  VLDB 2002»
16 years 6 months ago
Tree pattern query minimization
: Purpose ? Tree pattern is at the core of XML queries. The tree patterns in XML queries typically contain redundancies, especially when broad integrity constraints (ICs) are prese...
Sihem Amer-Yahia, SungRan Cho, Laks V. S. Lakshman...