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» On the Expressiveness and Complexity of ATL
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BMCBI
2005
124views more  BMCBI 2005»
15 years 6 months ago
Tools enabling the elucidation of molecular pathways active in human disease: Application to Hepatitis C virus infection
Background: The extraction of biological knowledge from genome-scale data sets requires its analysis in the context of additional biological information. The importance of integra...
David J. Reiss, Iliana Avila-Campillo, Vesteinn Th...
BMCBI
2004
149views more  BMCBI 2004»
15 years 6 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...
BMCBI
2002
214views more  BMCBI 2002»
15 years 6 months ago
Automated modelling of signal transduction networks
Background: Intracellular signal transduction is achieved by networks of proteins and small molecules that transmit information from the cell surface to the nucleus, where they ul...
Martin Steffen, Allegra Petti, John Aach, Patrik D...
BMCBI
2010
189views more  BMCBI 2010»
15 years 4 months ago
solQTL: a tool for QTL analysis, visualization and linking to genomes at SGN database
Background: A common approach to understanding the genetic basis of complex traits is through identification of associated quantitative trait loci (QTL). Fine mapping QTLs require...
Isaak Y. Tecle, Naama Menda, Robert M. Buels, Esth...
ICFEM
2009
Springer
15 years 4 months ago
Graded-CTL: Satisfiability and Symbolic Model Checking
In this paper we continue the study of a strict extension of the Computation Tree Logic, called graded-CTL, recently introduced by the same authors. This new logic augments the sta...
Alessandro Ferrante, Margherita Napoli, Mimmo Pare...